The Summer School provides hands-on training in computational analysis of proteomics data generated by modern mass spectrometers. The practical parts will enable participants to perform sophisticated quantitative data analysis in their own future research using the publicly available MaxQuant and Perseus software.
Prof. Dr. Bernhard Küster
TUM School of Life Sciences
Prof. Dr. Karl Helmut Grubmüller
MPI for Multidisciplinary Sciences
Prof. Dr. Enrico Cappellini
University of Copenhagen
Prof. Dr. Maria Robles
LMU Biomedical Center Munich
Time/Day | Sunday, September 08 | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 |
---|---|---|---|---|---|---|
00:00 |
|
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
00:45 |
|
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
01:30 |
|
Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
02:00 |
|
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
02:45 |
|
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
03:30 |
|
Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A | ||
18:45 | Opening | Announcements | Announcements | Announcements | Announcements |
|
19:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
|
19:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
|
20:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
|
21:00 |
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
|
21:45 |
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
|
22:30 | Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
|
Time/Day | Sunday, September 08 | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 |
---|---|---|---|---|---|---|
01:00 |
|
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
01:45 |
|
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
02:30 |
|
Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
03:00 |
|
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
03:45 |
|
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
04:30 |
|
Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A | ||
19:45 | Opening | Announcements | Announcements | Announcements | Announcements |
|
20:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
|
20:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
|
21:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
|
22:00 |
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
|
22:45 |
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
|
23:30 | Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
|
Time/Day | Sunday, September 08 | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 |
---|---|---|---|---|---|---|
00:30 |
|
Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
02:00 |
|
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
02:45 |
|
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
03:30 |
|
Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
04:00 |
|
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
04:45 |
|
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
05:30 |
|
Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A | ||
20:45 | Opening | Announcements | Announcements | Announcements | Announcements |
|
21:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
|
21:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
|
22:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
|
23:00 |
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
|
23:45 |
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
|
Time/Day | Sunday, September 08 | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 |
---|---|---|---|---|---|---|
00:00 |
|
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
00:45 |
|
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
01:30 |
|
Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
03:00 |
|
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
03:45 |
|
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
04:30 |
|
Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
05:00 |
|
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
05:45 |
|
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
06:30 |
|
Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A | ||
21:45 | Opening | Announcements | Announcements | Announcements | Announcements |
|
22:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
|
22:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
|
23:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
|
Time/Day | Sunday, September 08 | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 |
---|---|---|---|---|---|---|
00:30 |
|
Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
01:00 |
|
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
01:45 |
|
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
02:30 |
|
Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
04:00 |
|
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
04:45 |
|
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
05:30 |
|
Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
06:00 |
|
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
06:45 |
|
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
07:30 |
|
Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A | ||
22:45 | Opening | Announcements | Announcements | Announcements | Announcements |
|
23:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
|
23:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
|
Time/Day | Sunday, September 08 | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 |
---|---|---|---|---|---|---|
00:00 |
|
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
00:45 |
|
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
01:30 |
|
Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
02:00 |
|
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
02:45 |
|
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
03:30 |
|
Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
05:00 |
|
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
05:45 |
|
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
06:30 |
|
Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
07:00 |
|
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
07:45 |
|
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
08:30 |
|
Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A | ||
23:45 | Opening | Announcements | Announcements | Announcements | Announcements |
|
Time/Day | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 |
---|---|---|---|---|---|
00:45 | Opening | Announcements | Announcements | Announcements | Announcements |
01:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
01:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
02:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
03:00 |
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
03:45 |
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
04:30 | Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
06:00 |
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
06:45 |
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
07:30 | Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
08:00 |
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
08:45 |
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
09:30 | Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A |
Time/Day | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 |
---|---|---|---|---|---|
01:45 | Opening | Announcements | Announcements | Announcements | Announcements |
02:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
02:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
03:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
04:00 |
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
04:45 |
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
05:30 | Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
07:00 |
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
07:45 |
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
08:30 | Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
09:00 |
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
09:45 |
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
10:30 | Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A |
Time/Day | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 |
---|---|---|---|---|---|
02:45 | Opening | Announcements | Announcements | Announcements | Announcements |
03:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
03:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
04:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
05:00 |
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
05:45 |
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
06:30 | Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
08:00 |
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
08:45 |
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
09:30 | Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
10:00 |
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
10:45 |
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
11:30 | Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A |
Time/Day | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 |
---|---|---|---|---|---|
03:45 | Opening | Announcements | Announcements | Announcements | Announcements |
04:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
04:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
05:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
06:00 |
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
06:45 |
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
07:30 | Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
09:00 |
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
09:45 |
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
10:30 | Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
11:00 |
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
11:45 |
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
12:30 | Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A |
Time/Day | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 |
---|---|---|---|---|---|
04:45 | Opening | Announcements | Announcements | Announcements | Announcements |
05:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
05:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
06:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
07:00 |
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
07:45 |
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
08:30 | Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
10:00 |
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
10:45 |
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
11:30 | Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
12:00 |
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
12:45 |
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
13:30 | Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A |
Time/Day | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 |
---|---|---|---|---|---|
05:45 | Opening | Announcements | Announcements | Announcements | Announcements |
06:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
06:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
07:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
08:00 |
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
08:45 |
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
09:30 | Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
11:00 |
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
11:45 |
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
12:30 | Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
13:00 |
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
13:45 |
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
14:30 | Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A |
Time/Day | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 |
---|---|---|---|---|---|
06:45 | Opening | Announcements | Announcements | Announcements | Announcements |
07:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
07:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
08:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
09:00 |
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
09:45 |
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
10:30 | Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
12:00 |
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
12:45 |
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
13:30 | Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
14:00 |
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
14:45 |
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
15:30 | Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A |
Time/Day | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 |
---|---|---|---|---|---|
07:45 | Opening | Announcements | Announcements | Announcements | Announcements |
08:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
08:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
09:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
10:00 |
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
10:45 |
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
11:30 | Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
13:00 |
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
13:45 |
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
14:30 | Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
15:00 |
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
15:45 |
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
16:30 | Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A |
Time/Day | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 |
---|---|---|---|---|---|
08:45 | Opening | Announcements | Announcements | Announcements | Announcements |
09:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
09:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
10:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
11:00 |
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
11:45 |
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
12:30 | Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
14:00 |
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
14:45 |
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
15:30 | Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
16:00 |
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
16:45 |
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
17:30 | Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A |
Time/Day | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 |
---|---|---|---|---|---|
09:45 | Opening | Announcements | Announcements | Announcements | Announcements |
10:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
10:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
11:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
12:00 |
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
12:45 |
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
13:30 | Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
15:00 |
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
15:45 |
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
16:30 | Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
17:00 |
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
17:45 |
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
18:30 | Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A |
Time/Day | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 |
---|---|---|---|---|---|
10:45 | Opening | Announcements | Announcements | Announcements | Announcements |
11:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
11:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
12:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
13:00 |
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
13:45 |
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
14:30 | Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
16:00 |
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
16:45 |
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
17:30 | Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
18:00 |
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
18:45 |
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
19:30 | Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A |
Time/Day | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 |
---|---|---|---|---|---|
11:45 | Opening | Announcements | Announcements | Announcements | Announcements |
12:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
12:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
13:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
14:00 |
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
14:45 |
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
15:30 | Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
17:00 |
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
17:45 |
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
18:30 | Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
19:00 |
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
19:45 |
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
20:30 | Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A |
Time/Day | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 |
---|---|---|---|---|---|
12:45 | Opening | Announcements | Announcements | Announcements | Announcements |
13:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
13:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
14:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
15:00 |
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
15:45 |
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
16:30 | Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
18:00 |
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
18:45 |
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
19:30 | Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
20:00 |
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
20:45 |
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
21:30 | Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A |
Time/Day | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 |
---|---|---|---|---|---|
13:45 | Opening | Announcements | Announcements | Announcements | Announcements |
14:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
14:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
15:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
16:00 |
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
16:45 |
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
17:30 | Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
19:00 |
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
19:45 |
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
20:30 | Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
21:00 |
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
21:45 |
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
22:30 | Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A |
Time/Day | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 |
---|---|---|---|---|---|
14:45 | Opening | Announcements | Announcements | Announcements | Announcements |
15:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
15:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
16:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
17:00 |
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
17:45 |
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
18:30 | Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
20:00 |
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
20:45 |
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
21:30 | Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
22:00 |
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
22:45 |
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
23:30 | Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A |
Time/Day | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 | Saturday, September 14 |
---|---|---|---|---|---|---|
00:30 |
|
Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A | ||
15:45 | Opening | Announcements | Announcements | Announcements | Announcements |
|
16:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
|
16:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
|
17:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
|
18:00 |
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
|
18:45 |
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
|
19:30 | Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
|
21:00 |
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
|
21:45 |
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
|
22:30 | Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
|
23:00 |
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A |
|
|
23:45 |
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
|
Time/Day | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 | Saturday, September 14 |
---|---|---|---|---|---|---|
00:00 |
|
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
00:45 |
|
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
01:30 |
|
Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A | ||
16:45 | Opening | Announcements | Announcements | Announcements | Announcements |
|
17:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
|
17:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
|
18:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
|
19:00 |
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
|
19:45 |
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
|
20:30 | Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
|
22:00 |
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
|
22:45 |
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
|
23:30 | Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
|
Time/Day | Monday, September 09 | Tuesday, September 10 | Wednesday, September 11 | Thursday, September 12 | Friday, September 13 | Saturday, September 14 |
---|---|---|---|---|---|---|
00:30 |
|
Coffee break | Coffee break | Q&A | Coffee break | Coffee break |
01:00 |
|
T02: MaxQuant DDA intermediate
Shamil Urazbakhtin |
L09: MaxQuant Atlas
Daniela Ferretti |
L13: Isobaric labeling
Jinqiu Xiao |
Q&A | |
01:45 |
|
L05: MaxQuant.Live
Christoph Wichmann |
T05: MaxQuant Atlas
Daniela Ferretti |
T14: Isobaric labeling
Jinqiu Xiao |
||
02:30 |
|
Q&A |
L10: Ion mobility
Juan Restrepo Lopez |
Q&A | ||
17:45 | Opening | Announcements | Announcements | Announcements | Announcements |
|
18:00 |
L01: Andromeda search engine
Walter Viegener |
L06: DIA identification
Dmitry Alexeev |
T06: De-novo sequencing
Pelagia Kyriakidou |
T10: Perseus intermediate
Wenjie Bi |
T15: Interactions
Carlo De Nart |
|
18:45 |
L02: MaxQuant DDA workflow
Pelagia Kyriakidou |
L07: DIA quantification & multiplexing
Dmitry Alexeev |
T07: Dependent-peptide search
Juan Restrepo Lopez |
L12: PTMs
Caroline Lennartsson |
T16: Protein isoforms
Helen Hohenthanner & Pavel Sinitcyn |
|
19:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
|
20:00 |
L03: Label-free quantification
Jürgen Cox |
L08: Machine learning and spectrum prediction
Shamil Urazbakhtin |
L11: Perseus introduction
Juan Restrepo Lopez |
T11: PTMs
Pelagia Kyriakidou |
L14: Cross linking
Walter Viegener |
|
20:45 |
L04: Output tables
Carlo De Nart |
T03: DIA
Shamil Urazbakhtin |
T08: Perseus basics I
Wenjie Bi |
T12: PTMs DIA
Pelagia Kyriakidou |
T17: Cross linking
Walter Viegener |
|
21:30 | Lunch break | Lunch break | Lunch break | Lunch break | Lunch break |
|
23:00 |
Bernhard Küster
Keynote speaker |
Helmut Grubmüller
Keynote speaker |
Enrico Cappellini
Keynote speaker |
Maria Robles
Keynote speaker |
T18: Single cell proteomics
Dmitry Alexeev |
|
23:45 |
T01: MaxQuant DDA basics
Dmitry Alexeev |
T04: Metaproteomics
Jinqiu Xiao |
T09: Perseus basics II
Wenjie Bi |
T13: Perseus time-series
Lukas Huschet |
T19: Networks: PHOTON
Carlo De Nart |
|
Dr. Jürgen Cox
MPI of Biochemistry
Prof. Dr. Maria Robles
LMU Biomedical Center Munich
Prof. Dr. Tanja Bange
LMU Biomedical Center Munich
Jinqiu Xiao
MPI of Biochemistry
Pelagia Kyriakidou
MPI of Biochemistry
Lukas Huschet
LMU Biomedical Center Munich
Carlo De Nart
MPI of Biochemistry
Juan Restrepo Lopez
MPI of Biochemistry
Dmitry Alexeev
MPI of Biochemistry
Shamil Urazbakhtin
MPI of Biochemistry
Walter Viegener
MPI of Biochemistry
Dr. Wenjie Bi
MPI of Biochemistry
Our group ( CoxLab ) is currently looking for Postdocs. If you have expertise in Computational Biology with a programming background and you want to join our group contact Jürgen Cox: cox@biochem.mpg.de
For questions send an e-mail to the following address:
summerschool@maxquant.de
Physical address:
Max-Planck-Institute of Biochemistry - Computational Systems Biochemistry
Am Klopferspitz 18, D-82152 Martinsried, Germany